Workshop
Time Series Representation Learning for Health
Heike Leutheuser · Laura Manduchi · Alexander Marx · Emanuele Palumbo · Ece Özkan Elsen · Julia Vogt
Virtual
Fri 5 May, 1:10 a.m. PDT
Time series data have been used in many applications in healthcare, such as the diagnosis of a disease, prediction of disease progression, clustering of patient groups, online monitoring and dynamic treatment regimes, to name a few. More and more methods build on representation learning to tackle these problems by first learning a (typically low-dimensional) representation of the time series and then use the learned representation for the corresponding downstream task.Machine learning (ML) provides a powerful set of tools for time series data, but its applicability in healthcare is still limited. As a result, the potential of time series analysis cannot be fully realised currently. Furthermore, it is expected that in the coming years, the availability and nature of time series data will continue to increase. These data could support all components of healthcare to benefit everyone. Handling time series data is a challenge, especially in the medical domain, for reasons such as the following:- Labeling, in general and in particular of long-term recordings, is a nontrivial task requiring appropriate experts like clinicians who are restricted in their time- Time series data acquired within real-life settings and novel measurement modalities are recorded without supervision having no labels at all- The high-dimensionality of data from multimodal sources- Missing values or outliers within acquired data or irregularity of measured dataThis workshop focuses on these aspects and the potential benefits of integrating representation learning in time series applications. Our goal is to encourage a discussion around developing new ideas towards representation learning complemented with robust, interpretable, and explainable approaches which can provide a medical expert with more information than just a prediction result. We want to encourage participants to tackle challenges in the time series domain.
Schedule
Fri 1:10 a.m. - 1:15 a.m.
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Opening Remarks
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Opening Remarks
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Fri 1:15 a.m. - 1:45 a.m.
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Causal vs causality-inspired representation learning
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Invited Talk
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SlidesLive Video |
Sara Magliacane 🔗 |
Fri 1:50 a.m. - 2:20 a.m.
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Help – I Need Somebody! On the Importance of Humans in Sequential Decision-Making
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Invited Talk
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SlidesLive Video |
Sonali Parbhoo 🔗 |
Fri 2:20 a.m. - 2:25 a.m.
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Break
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Fri 2:25 a.m. - 2:35 a.m.
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Post-Hoc Uncertainty Quantification for QT Interval Measurements with Ensembles of Electrocardiographic Leads and Deep Models
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Spotlight Presentation
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SlidesLive Video |
Mously Diaw · Stéphane Papelier · Alexandre Durand-Salmon · Jacques Felblinger · Julien Oster 🔗 |
Fri 2:35 a.m. - 2:45 a.m.
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A Continuous-time Generative Model for EHR Time Series
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Spotlight Presentation
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SlidesLive Video |
Jingge Xiao · Leonie Basso · Niloy Ganguly · Sandipan Sikdar 🔗 |
Fri 2:45 a.m. - 2:55 a.m.
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Sound-Based Sleep Staging By Exploiting Real-World Unlabeled Data
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Spotlight Presentation
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SlidesLive Video |
11 presentersJongMok Kim · Daewoo Kim · Eunsung Cho · Hai Tran · Joonki Hong · Dongheon Lee · JungKyung Hong · In-Young Yoon · Jeong-Whun Kim · Hyeryung Jang · Nojun Kwak |
Fri 2:55 a.m. - 3:10 a.m.
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Spotlight Q & A
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Q & A
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SlidesLive Video |
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Fri 3:15 a.m. - 4:15 a.m.
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Diffsurv: Differentiable sorting for censored time-to-event data. ( Poster ) > link | Andre Vauvelle · Benjamin Wild · Sera Aylin Cakiroglu · Roland Eils · Spiros Denaxas 🔗 |
Fri 3:15 a.m. - 4:15 a.m.
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Clinical Trajectory Representations for Clustering ( Poster ) > link | Haobo Li · Alizée Pace · Martin Faltys · Gunnar Ratsch 🔗 |
Fri 3:15 a.m. - 4:15 a.m.
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Time-Dependent Iterative Imputation for Multivariate Longitudinal Clinical Data ( Poster ) > link | Omer Noy · Ron Shamir 🔗 |
Fri 3:15 a.m. - 4:15 a.m.
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EXPLORING A GRADIENT-BASED EXPLAINABLE TECHNIQUE FOR TIME-SERIES DATA: A CASE STUDY OF ASSESSING STROKE REHABILITATION EXERCISES ( Poster ) > link | Yi Choy · Min Lee 🔗 |
Fri 3:15 a.m. - 4:15 a.m.
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CLEEGN: A Convolutional Neural Network for Plug-and-Play Automatic EEG Reconstruction ( Poster ) > link | Pin-Hua Lai · Wei-Chun Yang · Hsiang-Chieh Tsou · Chun-Shu Wei 🔗 |
Fri 3:15 a.m. - 4:15 a.m.
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IVP-VAE: Modeling EHR Time Series with Initial Value Problem Solvers ( Poster ) > link | Jingge Xiao · Leonie Basso · Niloy Ganguly · Sandipan Sikdar 🔗 |
Fri 4:15 a.m. - 5:15 a.m.
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Lunch Break
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Fri 5:15 a.m. - 5:45 a.m.
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The Journey Towards Digital Twins: Current Challenge and Future Applications
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Invited Talk
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SlidesLive Video |
Tingting Zhu 🔗 |
Fri 5:50 a.m. - 6:00 a.m.
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Time Series as Images: Vision Transformer for Irregularly Sampled Time Series
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Spotlight Presentation
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SlidesLive Video |
Zekun Li · Shiyang Li · Xifeng Yan 🔗 |
Fri 6:00 a.m. - 6:10 a.m.
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Detecting Periodic Biases in Wearable-Based Illness Detection Models
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Spotlight Presentation
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SlidesLive Video |
Amit Klein · Varun Viswanath · Benjamin Smarr · Edward Wang 🔗 |
Fri 6:10 a.m. - 6:20 a.m.
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Modeling Multivariate Biosignals with Graph Neural Networks and Structured State Space
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Spotlight Presentation
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SlidesLive Video |
Siyi Tang · Jared Dunnmon · Liangqiong Qu · Khaled Saab · Tina Baykaner · Christopher Lee-Messer · Daniel Rubin 🔗 |
Fri 6:20 a.m. - 6:35 a.m.
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Spotlight Q & A
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Q & A
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Fri 6:35 a.m. - 6:45 a.m.
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Break
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Fri 6:45 a.m. - 7:15 a.m.
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MS Mosaic: A Multiple Sclerosis Mobile Study
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Invited Talk
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Katherine Heller 🔗 |
Fri 7:20 a.m. - 7:50 a.m.
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Time Series Representation Learning from Wearable Devices
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Invited Talk
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SlidesLive Video |
Tim Althoff 🔗 |
Fri 7:50 a.m. - 8:00 a.m.
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Break
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Fri 8:00 a.m. - 9:00 a.m.
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Round Table Discussion
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Round table discussion
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Fri 9:00 a.m. - 9:05 a.m.
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Closing Remarks
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Closing Remarks
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SlidesLive Video |
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Fri 9:05 a.m. - 10:00 a.m.
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Labeling EEG Components with a Bag of Waveforms from Learned Dictionaries ( Poster ) > link | Austin Meek · Carlos Mendoza-Cardenas · Austin Brockmeier 🔗 |
Fri 9:05 a.m. - 10:00 a.m.
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VARIATIONAL MODELLING OF TEMPORAL EHRS FOR PHENOTYPIC CLUSTERING ( Poster ) > link | Henrique Aguiar · Mauro Santos · Peter Watkinson · Tingting Zhu 🔗 |
Fri 9:05 a.m. - 10:00 a.m.
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DyNeMoC: A semi-supervised architecture for classifying time series brain data ( Poster ) > link | Abu Mohammad Shabbir Khan · Chetan Gohil · Pascal Notin · Joost van Amersfoort · Mark Woolrich · Yarin Gal 🔗 |
Fri 9:05 a.m. - 10:00 a.m.
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ForecastPFN: Universal Forecasting for Healthcare ( Poster ) > link | Gurnoor Khurana · Samuel Dooley · Siddartha Naidu · Colin White 🔗 |
Fri 9:05 a.m. - 10:00 a.m.
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SILICONet : A Siamese Lead Invariant Convolutional Network for Ventricular Heartbeat Detection in Electrocardiograms (ECG) ( Poster ) > link | Pierre Aublin · Jacques Felblinger · Julien Oster 🔗 |
Fri 9:05 a.m. - 10:00 a.m.
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Clinically Relevant Unsupervised Online Representation Learning of ICU Waveforms ( Poster ) > link | Faris Gulamali · Ashwin S Sawant · Ira Hofer · Matt Levin · Karandeep Singh · Benjamin Glicksberg · Girish Nadkarni 🔗 |
Fri 9:05 a.m. - 10:00 a.m.
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Detecting Periodic Biases in Wearable-Based Illness Detection Models ( Poster ) > link | Amit Klein · Varun Viswanath · Benjamin Smarr · Edward Wang 🔗 |
Fri 9:05 a.m. - 10:00 a.m.
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Modeling Multivariate Biosignals with Graph Neural Networks and Structured State Space ( Poster ) > link | Siyi Tang · Jared Dunnmon · Liangqiong Qu · Khaled Saab · Tina Baykaner · Christopher Lee-Messer · Daniel Rubin 🔗 |
Fri 9:05 a.m. - 10:00 a.m.
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Time Series as Images: Vision Transformer for Irregularly Sampled Time Series ( Poster ) > link | Zekun Li · Shiyang Li · Xifeng Yan 🔗 |